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MedAgentBoard: Benchmarking Multi-Agent Collaboration with Conventional Methods for Diverse Medical Tasks

Conference: NeurIPS 2025 (Datasets & Benchmarks Track)

arXiv: 2505.12371

Code: GitHub | Project Page

Area: Medical Imaging / AI for Medicine

Keywords: multi-agent collaboration, medical benchmarking, LLM, clinical workflow, EHR prediction

TL;DR

This paper proposes MedAgentBoard, a comprehensive benchmark that systematically evaluates multi-agent collaboration, single-LLM, and conventional methods across diverse medical tasks, revealing that multi-agent collaboration does not consistently outperform strong single models or specialized conventional approaches.

Background & Motivation

  • The multi-agent LLM trend: A growing body of work has introduced multi-agent collaboration into the medical domain, yet its practical advantages remain unclear.
  • Limitations of existing evaluations:
  • Task coverage is insufficiently broad, lacking diversity representative of real clinical scenarios.
  • Rigorous comparisons with specialized conventional methods are absent (most works only compare across LLMs).
  • Data modalities are limited, overlooking structured EHR data and medical imaging.
  • Core Problem: Does the added complexity and overhead of multi-agent systems genuinely yield performance gains?
  • Research positioning: To provide a comprehensive, evidence-based evaluation that assists researchers in selecting appropriate AI solutions.

Method

Overall Architecture

MedAgentBoard covers 4 major categories of medical tasks spanning 3 data modalities (text, medical imaging, and structured EHR), systematically comparing 3 classes of methods:

Task Category Data Modality Datasets
Medical QA Text MedQA, PubMedQA
Medical VQA Image + Text PathVQA, VQA-RAD
Lay Summary Generation Text PLOS/eLife
EHR Predictive Modeling Structured Data MIMIC-III/IV
Clinical Workflow Automation Multimodal Custom scenarios

Key Designs

Three-Way Comparison Framework

  1. Conventional Methods:

    • Text QA: BioLinkBERT, GatorTron
    • VQA: Specialized VLMs such as MยณAE
    • EHR: XGBoost, LSTM, Transformer, etc.
  2. Single-LLM Methods:

    • Zero-shot / Few-shot ICL / Chain-of-Thought
    • Models include GPT-4o, Claude 3.5, Gemini, etc.
  3. Multi-Agent Collaboration Frameworks:

    • MedAgents: multi-role discussion and collaboration
    • ReConcile: multi-model voting and reconciliation
    • General-purpose frameworks such as AutoGen

Evaluation Dimensions

  • Correctness: Accuracy (multiple-choice), BLEU/ROUGE (generation tasks)
  • Clinical Relevance: LLM-as-a-judge scoring
  • Efficiency: API call count, token consumption, latency
  • Robustness: Consistency across datasets

Loss & Training

As a benchmark paper, the focus lies on evaluation protocol design rather than model training: - All LLM-based methods use unified prompt templates. - Conventional methods follow optimal configurations reported in their original papers. - Evaluation metrics are standardized across tasks. - Results are averaged over multiple runs to reduce variance.

Key Experimental Results

Main Results

Medical Text QA Results

Method Category Method MedQA Accโ†‘ PubMedQA Accโ†‘ Category
Conventional BioLinkBERT 45.2 72.8 Conventional
Conventional GatorTron 48.1 74.5 Conventional
Single LLM GPT-4o (Zero-shot) 82.3 78.1 Single LLM
Single LLM GPT-4o (CoT) 85.7 80.4 Single LLM
Single LLM Claude 3.5 (CoT) 83.9 79.2 Single LLM
Multi-Agent MedAgents 83.1 78.8 Multi-Agent
Multi-Agent ReConcile 84.2 79.5 Multi-Agent

Finding: On medical text QA, an advanced single LLM (GPT-4o + CoT) suffices to achieve optimal performance; multi-agent systems yield no significant improvement.

Medical VQA and EHR Prediction Results

Method Category PathVQA Accโ†‘ VQA-RAD Accโ†‘ MIMIC Mortality AUROCโ†‘
Conventional VLM (MยณAE) 72.3 74.8 โ€”
GPT-4o Vision 65.7 68.2 0.71
Multi-Agent VQA 64.9 67.5 0.69
XGBoost โ€” โ€” 0.84
LSTM โ€” โ€” 0.81
LLM (numerical reasoning) โ€” โ€” 0.68

Finding: Specialized conventional methods still significantly outperform LLM-based approaches on VQA and EHR prediction.

Ablation Study

Multi-Agent vs. Single-LLM Efficiency Comparison

Method Accuracy API Calls Token Consumption Latency (s)
GPT-4o (Single) 85.7 1 2.1K 3.2
MedAgents (3 roles) 83.1 5โ€“8 12.5K 18.7
ReConcile (3 models) 84.2 3 7.8K 11.4

Finding: Multi-agent systems consume 4โ€“6ร— more tokens than single-LLM methods, while yielding limited or even negative performance gains.

Key Findings

  1. Multi-agent โ‰  better: Across 4 task categories, multi-agent systems demonstrate advantages only in task completeness within clinical workflow automation.
  2. Conventional methods remain competitive: Specialized fine-tuned models significantly outperform all LLM-based methods on VQA and EHR prediction.
  3. Single-LLM CoT is sufficiently powerful: A high-quality single model with a well-designed prompt outperforms collaboration among multiple mediocre models.
  4. Asymmetric costโ€“benefit trade-off: Multi-agent systems incur 4โ€“6ร— greater computational overhead, yet achieve on average less than 1% performance improvement.
  5. Task specificity: No universally optimal method exists; method selection must be guided by the specific task at hand.

Highlights & Insights

  • A grounded benchmark: This work offers a sober evaluation amid the multi-agent enthusiasm, demonstrating that "multi-agent is not a silver bullet."
  • Fair comparison design: Incorporating conventional methods into the comparison is a core contribution of this benchmark, filling a critical gap in existing evaluations.
  • Full multimodal coverage: Simultaneously covering text, imaging, and structured data reflects the diversity of real clinical settings.
  • Actionable guidance: The benchmark provides practitioners with principled guidelines on when to use multi-agent systems, single models, or conventional methods.

Limitations & Future Work

  1. Rapid LLM evolution: Benchmark results for specific LLMs may become outdated quickly as newer models (e.g., GPT-5) emerge.
  2. Limited multi-agent framework coverage: Only a small number of frameworks are evaluated; novel collaboration paradigms (e.g., debate, reflection) could be incorporated.
  3. Incomplete task coverage: Important clinical tasks such as medical image segmentation and radiology report generation are not included.
  4. Fairness of comparison: Conventional methods are carefully fine-tuned, whereas LLMs are largely evaluated in zero/few-shot settings, introducing an inherent asymmetry.
  5. Real-world deployment evaluation: Assessment of practical clinical deployment scenariosโ€”such as latency requirements and privacy constraintsโ€”is absent.
  • MedAgents (Tang et al., 2024): A multi-agent discussion framework for medical reasoning.
  • AgentBench (Liu et al., 2024): A general-purpose benchmark for LLM agents.
  • HELM-Med: A medical LLM evaluation suite.
  • Insights: The three-way comparison paradigm proposed in this benchmark (conventional vs. single LLM vs. multi-agent) is generalizable to other domains such as law and finance.

Rating

Dimension Score (1โ€“5) Notes
Novelty 3.5 Contribution lies in evaluation perspective rather than technical methodology
Technical Depth 3 Benchmark work; moderate technical complexity
Experimental Thoroughness 4.5 Broad coverage and comprehensive comparisons
Practical Value 4.5 Directly actionable for medical AI method selection
Writing Quality 4 Clear structure; findings are precisely articulated
Overall 4.0 An important benchmark contribution with sober and insightful findings